net.sf.varscan
Class Somatic

java.lang.Object
  net.sf.varscan.Somatic

public class Somatic
extends java.lang.Object

A class for determining somatic status of variants from Normal/Tumor pileup files

Version:

2.2

Author:

Daniel C. Koboldt

Constructor Summary

Somatic(java.lang.String[] args)

Somatic(java.lang.String[] args, boolean isMpileup)

Method Summary

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Somatic

public Somatic(java.lang.String[] args,
               boolean isMpileup)

Somatic

public Somatic(java.lang.String[] args)